Top 10 Water Villas in Malaysia

Malaysia’s stunning tropical coastline and serene islands offer a handful of world-class water villas where luxury meets nature. Whether nestled over the clear waters of the South China Sea or perched above secluded coves, these villas are perfect for honeymoons, romantic getaways, or lavish retreats.
1. Lexis Hibiscus Port Dickson – Negeri Sembilan
Why Go: Home to the world’s largest overwater villas, each with a private pool and steam room.
Highlights:
- 522 overwater villas shaped like a hibiscus flower
- Private dip pool and sauna in every unit
- Family-friendly & near KL
Rates: From RM900+ per night
Website: www.lexis.my
2. Pangkor Laut Resort – Perak
Why Go: Private island luxury with traditional Malay architecture on stilts.
Highlights:
- Sea and Spa Villas built above the water
- Jungle-meets-luxury island vibe
- Exclusive beach access
Rates: From RM1,300+ per night
Website: www.pangkorlautresort.com
3. AVANI Sepang Goldcoast Resort – Selangor
Why Go: Polynesian-style overwater villas shaped like a palm tree.
Highlights:
- 315 villas over the Straits of Malacca
- Sunset views & overwater spa
- Near KLIA – great for a quick luxury escape
Rates: From RM700+ per night
Website: www.avanihotels.com
4. Mabul Water Bungalows – Sabah
Why Go: Perfect for divers with direct access to Sipadan and Mabul’s marine treasures.
Highlights:
- Luxurious dive resort
- All-inclusive packages available
- Marine-rich waters below
Rates: From RM1,900+ per night (full board)
Website: www.mabulwaterbungalows.com
5. Sipadan Kapalai Dive Resort – Sabah
Why Go: Dreamlike “floating village” with no actual land – just sandbanks and stilts.
Highlights:
- Surreal turquoise surroundings
- Great for snorkeling & diving
- Rustic-luxury vibe
Rates: From RM1,600+ per night (full board)
Website: www.sipadan-kapalai.com
6. Berjaya Langkawi Resort – Kedah
Why Go: Budget-friendly luxury with rainforest and sea views.
Highlights:
- Premier Chalets on Water with private balconies
- Beachfront location
- Close to Langkawi Sky Bridge and cable car
Rates: From RM700+ per night
Website: www.berjayahotel.com
7. The St. Regis Langkawi – Kedah
Why Go: Opulent overwater villas with butler service and private pools.
Highlights:
- Sunset-facing overwater villas
- Exceptional F&B, Iridium Spa
- Part of Marriott Bonvoy
Rates: From RM4,500+ per night
Website: www.marriott.com
8. Gayana Marine Resort – Gaya Island, Sabah
Why Go: A marine conservation-focused resort with eco-luxury water villas.
Highlights:
- Reef Villas with direct sea access
- On-site marine ecology center
- Close to Kota Kinabalu
Rates: From RM1,000+ per night
Website: www.gayanamarineresort.com
9. Bunga Raya Island Resort – Gaya Island, Sabah
Why Go: Rustic-chic villas with stilted options overlooking the sea.
Highlights:
- Laid-back beach luxury
- Jungle & sea fusion
- Excellent snorkeling nearby
Rates: From RM1,200+ per night
Website: www.bungarayaresort.com
10. Pom Pom Island Resort – Sabah
Why Go: Remote barefoot luxury with overwater villas perfect for honeymooners.
Highlights:
- Pristine beach & vibrant coral reef
- Wooden villas with sunrise/sunset views
- Quiet and eco-conscious
Rates: From RM1,400+ per night (full board)
Website: www.pompomisland.com
Final Thoughts
From eco-conscious retreats to lavish celebrity-worthy resorts, Malaysia’s water villas offer unforgettable experiences above turquoise waters. Whether you’re after romance, seclusion, or scuba diving adventures, there’s a perfect villa waiting.